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Role of the Lab - Surveillance

As mentioned in the previous step, the microbiology lab plays an important role in optimising management of a patient with an infection or suspected infection. In addition to contributing to the management of individual patients, the microbiology lab plays a part in the surveillance of the epidemiology and occurrence of resistance within an institution.

One way to observe the susceptibility rates and monitor resistance trends within an institution is to use an antibiogram.

Antibiograms

An antibiogram is a cumulative summary of in vitro antimicrobial susceptibility test results obtained with bacteria and/or fungi recovered from patients with infection over a defined period of time in a given healthcare setting. Made correctly the information contained in cumulative antibiograms can serve as a valuable tool for optimising antimicrobial therapy in patients with infection and an extremely useful information resource for active antimicrobial stewardship programs.

Antibiograms are often used by clinicians to assess local susceptibility rates, as an aid in selecting empiric antibiotic therapy, and in monitoring resistance trends over time within an institution.

Example Antibiogram- table various species of bacteria (and number of organisms) tested and their percentage susceptibility against various antibiotics- please see the pdf in the downloads section for the whole table

Click to enlarge Please find a pdf version below in the downloads section.

Creating Antibiograms

Key things to remember:

Restrict to isolates that are clinically significant - The antimicrobial susceptibility information included should be restricted to organisms of known (or at least highly suspected) clinical significance. The inclusion of results obtained with nonclinically significant isolates can lead to erroneous and potentially clinically misleading information, and should be avoided.

Eliminate duplicate isolates - It is also very important to avoid the inclusion of susceptibility test results that have been obtained from what are essentially multiple isolates of the same organism from the same patient A simple way to achieve this is to only include the first isolate of a given organism from an individual patient.

What to measure? For a cumulative antibiogram, the percentage of isolates determined to be susceptible should be tallied.

How many isolates? At least 30 unique patient isolates of a particular organism tested against a given antimicrobial agent within no more than a one year period are required before that drug–bug combination can reliably be reported on a cumulative antibiogram.

Which antimicrobial agents should be included? Only agents that can reliably be tested in the laboratory against specific organisms are candidates for inclusion.

Cumulative antibiograms should be compiled at least once annually. The concept of developing antibiograms for specific care areas is highly desirable, but only if sufficient numbers of unique patient isolates can be tested. One important consideration in crafting care area-specific antibiograms is to ensure that the organisms that are included actually originated in, and are representative of, that care area. For more information on how to carry out these studies please see the additional resources linked below.

The microbiology lab is involved in other forms of surveillance, in addition to antibiograms. These are covered later in week 2.


Let us know in the comments below:

  • Does your institution use any new diagnostic techniques to carry out sample testing?

  • Does your institution carry out an annual accumulative antibiogram?

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This article is from the free online course:

Antimicrobial Stewardship for the Gulf, Middle East and North Africa

BSAC