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Online course

Statistical Shape Modelling: Computing the Human Anatomy

Learn the technology of modelling, as used in computational face recognition or in surgeries, with this free online course.

What’s the difference between a free course and an upgraded course?

Free:

  • Access to the course for its duration + 14 days, regardless of when you join (this includes access to articles, videos, peer review steps, quizzes)
  • No access to course tests
  • No certificate

Upgraded:

  • Unlimited access to the course, for as long as it exists on FutureLearn (this includes access to articles, videos, peer review steps, quizzes)
  • Access to course tests
  • A Certificate of Achievement when you complete the course

Find out more

Statistical Shape Modelling: Computing the Human Anatomy

Why join the course?

Statistical shape models are one of the most important technologies in computer vision and medical image analysis. With this technology, the computer learns the characteristic shape variations of an object or organ. The model resulting from this analysis may then be used in implant design, image analysis, surgery planning and many other fields.

In this free online course, you will get insights from mathematics, statistics and machine learning, in order to address practical problems, as well as a theoretical and practical introduction to the open source software Scalismo.

Download video: standard or HD

What topics will you cover?

  • Modelling families of anatomical shapes
  • Basic theory of Gaussian processes for modelling shape variations
  • Usage of the shape modelling software Scalismo
  • Building classical statistical shape models from example data
  • Reconstruction of partially observed shapes
  • Fitting statistical shape models to surfaces
  • Establishing point-to-point correspondence between example shapes
  • Fitting statistical shape models to images

When would you like to start?

  • Date to be announced

What will you achieve?

By the end of the course, you'll be able to...

  • Model the normal shape variations of anatomical shapes using Gaussian processes
  • Explore the mathematical concept of Gaussian processes visually on 3D shapes
  • Apply the theoretical concepts of shape modelling to clinically relevant problems in shape and image analysis
  • Develop programs for building and fitting statistical shape models to images using the open source software Scalismo

Who is the course for?

This course is intended for students and professionals with a Bachelor in computer science, medical imaging professionals and biological anthropologists, who are interested in top-notch research, scientific insights and a useful application.

Although you can watch the videos, read the articles, and complete the tests and quizzes on mobile devices such as smartphones or tablets, you will have to install the free software Scalismo on your own workstation in order to use it – there is no online version available.

In order to be able to do this, your computer should meet the following minimum system requirements: Windows (32bit/64bit), Mac OS X or Linux (64bit), 4GB of RAM, 500MB of free HD space. There are no special requirements for the graphic adapter.

Who will you learn with?

Marcel Lüthi

I am researcher in computer science at the University of Basel. My research focus is the mathematical modelling of shapes and its application to medical image analysis.

Ghazi Bouabene

I am a scientific collaborator at the mathematics and computer science department of the University of Basel and one of the developers of Scalismo: https://github.com/unibas-gravis/scalismo

Who developed the course?

What’s the difference between a free course and an upgraded course?

Free:

  • Access to the course for its duration + 14 days, regardless of when you join (this includes access to articles, videos, peer review steps, quizzes)
  • No access to course tests
  • No certificate

Upgraded:

  • Unlimited access to the course, for as long as it exists on FutureLearn (this includes access to articles, videos, peer review steps, quizzes)
  • Access to course tests
  • A Certificate of Achievement when you complete the course

Find out more

Get extra benefits, upgrade this course. For $59 you'll get:

Unlimited access

Upgrading will mean you get unlimited access to the course.

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  • Take the course at your own pace
  • Refer to the material at any point in future

If you’re taking a course for free you have access to the course for its duration + 14 days, regardless of when you join. If you upgrade the course you have access for as long as the course exists on FutureLearn.

Access to tests

When you upgrade you’ll have access to any tests during the course.

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  • Validate your learning
  • Ensure you have mastered the material
  • Qualify for a certificate

To receive a Certificate of Achievement you need to take any tests and score over 70%. You don’t get access to tests if you choose to take a course for free.

Certificate of Achievement

Upgrading means you’ll receive a Certificate of Achievement when you complete the course.

Image certificate mobile

  • Prove your success when applying for jobs or courses
  • Celebrate your hard work
  • Display on your LinkedIn or CV
  • Includes free shipping

To receive a Certificate of Achievement you need to mark 90% of the steps on the course as complete, and score over 70% on any course tests.

Upgrade


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