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Practical: Region-based segmentation

A practical on region based segmentation using the statistical region merging in Fiji

Screenshots from Fiji of an image of a green leaf, alongside two segmented version of the same image, with increasing numbers of regions set as a parameter. Using a higher of number regions also segments out some of the background.

A quick look at a region-based segmentation using the Statistical Region Merging plugin in Fiji.

The instructions are in the attached pdf in Downloads below.

The image used in the example can be found here: leaf.png

Please let us know how you get on in the comments.

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This content is taken from The University of Nottingham online course

Introduction to Image Analysis for Plant Phenotyping

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Introduction to Image Analysis for Plant Phenotyping

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