Course: Bacterial Genomes II: Accessing and Analysing Microbial Genome Data Using Artemis

In this Project we looked at the reductive evolution shown in Myobacterium leprae which has resulted in specific genomic and subsequently metabolic changes that makes M. lepae dramatically different from …

In this Step, we will use Artemis. We will isolate a region of interest in the Salmonella typhi genome. We will analyse this region and save it in various file …

Here are some Frequently Asked Questions for this course. This step will be linked back from the relevant steps and you can always get back to it later I cannot …

Many thanks to all those who are and were involved in the ‘Bacterial Genomes: Accessing and Analysing Microbial Genome Data’ course’s development, refinements, and presentations. Course Lead Educators and Lead …

We hope you have enjoyed your time with us. During the length of this three-week course you have become familiar with whole genome sequences, and the tools we can use …

In this Step you will explore 5 different pseudogenes across the Mycobacterium leprae genome, you will investigate their annotation and make comments on their GC content. Previously we described just …

In this Step, you will learn how to download a full genome sequence and annotation files for a whole bacterial genome, from a public repository. You will also learn how …

In this Step, we will learn that GC content changes along a genome. We will also learn to display GC content in Artemis and what genome features can be associated …

In this interview, Professor Julian Parkhill, from the Wellcome Sanger Institute, talks with Dr. Anna Protasio. He answers our questions on pathogenicity islands, describing what they are and explaining their …

In this short video, we will review the concept of GC content and calculation using windows. We will also show a short demonstration in Artemis. We can calculate the percentage …

In this Video Step, Martin Aslett demonstrates how you can open an annotation file in Artemis and examine the information that it contains. You are welcome to follow along on …

In this Step we will learn about the GC (guanine-ctytosine) content of a DNA and how to calculate it. This will be useful for later Steps. One of the characteristics …