Course: Making sense of genomic data: COVID-19 web-based bioinformatics

In this video, Dr Ewan Harries shares his experiences dealing with legal considerations when sharing data among partners from different countries. Read more about the challenges and limitations of data …

As humans, we have an innate ability and even NEED to spot patterns. Psychologists have found that we use patterns to build rules that guide us to make faster and …

The collaborative nature of bioinformatics and genomics research requires openness and data sharing amongst scientists, researchers and innovators. Bioinformatics databases represent organised bodies of data associated with computer software designed …

Large-scale sequencing – a limitation to the quality Since the pandemic began multiple consortiums and collaborations between public and private sectors have been established to sequence and publish the SARS-CoV-2 …

Today you can sequence the SARS-CoV-2 genome within hours once a case of COVID-19 positive is identified. This has enabled the creation of molecular diagnostic assays, improved global preparedness, and …

In this video, you are going to learn to access publicly available SARS-CoV-2 genomes and download them. You will also learn how to download the metadata associated with the genomes. …

In this step, you will learn how to reconstruct a phylogenetic tree of SARS-CoV-2 genomes. The first step is generating a multiple sequence alignment using MAFFT. Then we will reconstruct …

In this tutorial, you will learn how to assign clade and lineage to the assembled SARS-CoV-2 genomes. The input of this tutorial is the assembled genomes generated in step 1-21 …